Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916766.1_cds_XP_016466450.1_59301
CDS Infomation

[gene=LOC107789189] [db_xref=GeneID:107789189] [protein=tryptophan synthase beta chain 2-like] [protein_id=XP_016466450.1] [location=complement(join(13796..14052,14169..14267,14350..14887,15093..15309,15397..15730,16867..16900))] [gbkey=CDS]
Sequence

ATGGCACTATCCCCCCCAAATCTGTATGCAAAAGGTGATGCTTATGGGATTAAGTATTTT
GAGATTAAGACAAAGCCAAGTCAATTAAAGCTTTGCTTCAGCTGTAGAGCAAGGGCAAAG
GCAGCTCTTAGTACTCGTTCGAGCTCCATTGAAGTTCCTCGTCAGTGGTACAATCTAGTT
GCGGACCTTCCAATCAAACCTCCACCACCTTTGCATCCCAAGACTTTTCAACCTATCAAG
CCTGAGGATTTGTCTCCTCTTTTCTGCGATGAGTTGATTAAGCAGGAGGCAAGCATCGAC
CAGTTTATTGATATACCGGAAGAAGTTTTAGATGTCTACAGCCTTTGGCGCCCGACCCCT
CTGATTAGAGCTAAGAGGTTGGAGAAATTGCTTGATACACCTGCGCGAATATATTACAAG
TATGAAGGCGGTAGCCCAGCAGGTTCGCACAAGCCCAACACTGCTGTTCCTCAGGCCTGG
TACAATAAAATGGGAAGTGTCAAAAATGTAGTAACGGAGACTGGGGCAGGACAATGGGGG
AGCGCACTATCATTTGCTTGCAGCTTATTTGGTCTCAACTGTGAGGTATGGCAAGTTAGA
GCGTCTTTTGATCAGAAACCCTATCGTAAAATGATGATGCAAACTTGGGGTGCCAAGGTG
CACCCTTCTCCTTCTGACCTTACAGAGGCTGGTCGGACTATTCTACGAATGGATCCTTCA
AGTCCAGGAAGTTTAGGTATAGCTATTTCAGAGGCTGTGGAGATTGCAGCTACAAATGCT
GACACTAAGTATTGCTTAGGAAGTGTTCTTAATCATGTTTTGTTACATCAGACTGTTATC
GGTGAGGAGTGTATAAAACAGATGGAGGATTTTGGAGAGACTCCAGATGTGATCATTGGT
TGCACTGGGGGTGGATCCAATTTTGCTGGACTTGCTTTCCCATTTATCCGCGAGAAGCTT
AAGGGAAAAATTAATCCTCTTATTAGAGCGGTTGAACCTGCAGCTTGCCCCTCCTTGACG
AAAGGCGTATATGCTTATGACTATGGAGACACAGCAGGCATGACTCCGTTAATGAAAATG
CATACACTTGGTCATGACTTCATACCGGACCCCATTCACGCCGGGGGGCTTCGTTACCAT
GGCATGGCGCCATTGATATCACACGTCTATGAATTGGGTTTTATGGAAGCAATATCAATT
CCCCAGACTGAATGTTTTAAAGGCGCGATACAGTTTGCTAGGTCCGAGGGATTGATACCT
GCACCAGAACCAACTCATGCAATAGCTGCCACAATCAGGGAAGCTCTACGATGTAAAGAG
AGAGGAGAATCGAAAGTTATACTCATGGCAATGTGTGGACATGGCCATTTTGATTTGTCA
TCTTATGATAAGTATTTGCAGGGTAGCTTGGTTGATTTGTCATTTTCAGAAGAGAAAATA
AAAGCCTCACTGGCCAAAATACCCCAACCAATGTCCTAA

Peptide Sequence

PEP ID

XP_016466450.1
PEP Infomation

PREDICTED: tryptophan synthase beta chain 2-like [Nicotiana tabacum]
Sequence

MALSPPNLYAKGDAYGIKYFEIKTKPSQLKLCFSCRARAKAALSTRSSSIEVPRQWYNLV
ADLPIKPPPPLHPKTFQPIKPEDLSPLFCDELIKQEASIDQFIDIPEEVLDVYSLWRPTP
LIRAKRLEKLLDTPARIYYKYEGGSPAGSHKPNTAVPQAWYNKMGSVKNVVTETGAGQWG
SALSFACSLFGLNCEVWQVRASFDQKPYRKMMMQTWGAKVHPSPSDLTEAGRTILRMDPS
SPGSLGIAISEAVEIAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEDFGETPDVIIG
CTGGGSNFAGLAFPFIREKLKGKINPLIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKM
HTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGFMEAISIPQTECFKGAIQFARSEGLIP
APEPTHAIAATIREALRCKERGESKVILMAMCGHGHFDLSSYDKYLQGSLVDLSFSEEKI
KASLAKIPQPMS

Transcript Sequence

Gene sequence data has not been registered.